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Manipulation of Semi Global Alignment algorithm in Bioinformatics, the pattern and text are matched/aligned to check the percentage of similarity, the percentage of false positive and the percentage of false negative. It uses dynamic programming technique matrices. Gap penalties/ score for both pattern and text are introduced and also match and mismatch score. Schonlau dataset was used to check the performance of the algorithm. The Semi Global alignment will be redesigned/redevelop/tweaked/ manipulated to give better performance hit rate more than 88 % compared to 82.1% stated in the document ([url removed, login to view])

The project to be delivered will contain these :

[url removed, login to view] is required and will be used to implement the new algorithm you redesign

[url removed, login to view] interface will be designed for the input text and pattern and output to physically reflect result performance and the graph

3. The hit rate will be over 88% and the false positive rate will be below 5%

4. there is dataset called Schonlau dataset found on ([url removed, login to view]) that is used as benchmark to check the performance of the algorithms separately.

The result will give

- false positive

- false negative

-hit rate ( the formula for the metrics is found in the attached documents)

5. The results and the interface will look like the one found in the document (An improvement on semi global alignment [url removed, login to view]).

6. Explanation for the results

Thanks as I await your bid

Compétences : Algorithme, Java

Voir plus : design implementation freelance portal, finish design implementation

Concernant l'employeur :
( 0 commentaires ) IBADAN, Nigeria

N° du projet : #14811427

Décerné à :


Hi I am B.Tech (CS) and have domain knowledge on Bioinformatics Samples of my work will be provided Relevant Skills and Experience i have qualification, experience and skills in this work references and sample o Plus

80 $ USD en 3 jours
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10 freelance ont fait une offre moyenne de 208 $ pour ce travail


Dear sir! I have extension experienced in developing Algorithm, Java. I am very familiar with Algorithm, Java. High-Quality+fast development+good credit+fast communication=My work method! My first aim is to provide Plus

155 $ USD en 3 jours
(3 Commentaires)

hello, i am a PhD in computer science and engineering, i can do this task perfectly, Relevant Skills and Experience i can give you samples, message me for that, i got more than 20 research papers in SCI journals, th Plus

555 $ USD en 20 jours
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If you want this project to be done with high level of professionalism choose me. I take every project seriously. I would deliver high quality tool for your needs. Relevant Skills and Experience I am highly experience Plus

300 $ USD en 7 jours
(5 Commentaires)

-------------------------------Professional JAVA Developer! Best Result in Time!----------------------------- Relevant Skills and Experience Dear sir. I read your project description very carefully. I've really rich Plus

200 $ USD en 3 jours
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155 $ USD en 3 jours
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I am did more algorithms inn my projects for Artificial intelligence app and for gaming,I have done java windows and web application. I thought i can do in 4 days. Let me know. Relevant Skills and Experience JAVA,algo Plus

111 $ USD en 4 jours
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This is a piece of cake. I can do it. Stay tuned, I'm still working on this proposal.

155 $ USD en 3 jours
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